genewise output
Score 146.87 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000648_2.0    4 EDGARVRNEDVPPQNQDLSFLQPS                          
                     E G   + E  PP+NQDLSF                              
                     EAGVPYQVERAPPKNQDLSFFSQF          V:A[gca]        
OMLM01015868.1-43191 ggggctcggagccaacgcattactGGTAACTT  Intron 1        
                     acgtcaatagcccaaaatgttgat <1-----[43118:41933]     
                     atagttggaagctacgtgcctcat                          


SPP00000648_2.0   28      TAFMSEYGWYLLFGCVGVYLLIQHLRKSRSSTQTRSSSGSAEAH 
                            ++S+YGWYLL   V VYLLIQHL K R+S     SS       
                          GELLSQYGWYLLVFTVLVYLLIQHLSKRRTS----QSSPPHTEQ 
OMLM01015868.1-41935 CAGCAggcctctgttccgtagcgtccacccaaaaaa    catcccagc 
                     -1>  gattcaaggattttctttatttaatgaggcg    agcccacaa 
                          ggcgcgtggccgtctgtccgccacgcgaacc    acaccctga 


SPP00000648_2.0   73                           VGSVVRRQEALEASRRRMQEEQD 
                                                  V RRQEA+EA+RRRMQEE D 
                               D:D[gat]        ASLVSRRQEAMEAARRRMQEELD 
OMLM01015868.1-41810 GGTTAGCA  Intron 2   TAGATgtcgtaacggagggcaaacggcg 
                      <1-----[41809:40997]-1>  ccttcggaactaccgggtaaata 
                                               taggaagaacgaagaaggaggtt 


SPP00000648_2.0   97 ARAAEFREKQRM                       LEEEKRRQKIEMWD 
                     A+AA F+EKQ++                        EEEKRRQKIE+W+ 
                     AKAAAFKEKQKQ                       QEEEKRRQKIEIWE 
OMLM01015868.1-40925 gagggtagacacGTGCAGA  Intron 3   CAGcgggaaacaagatg 
                     caccctaaaaaa<0-----[40889:40797]-0>aaaaaggaatatga 
                     taattcaaagag                       aaagggggacgagg 


SPP00000648_2.0  123 SMQEGKSYKGSAKVAQ                       QNTEEAASSS 
                     SM++G+SYKG  K++Q                          E ++S++ 
                     SMRQGQSYKGGTKISQ                       TTEEASSSTT 
OMLM01015868.1-40754 aaccgcataggaaatcGTTAGTT  Intron 4   CAGaagggattaa 
                     gtgagagaaggcatca<0-----[40706:39774]-0>ccaacgcccc 
                     tgagggtcaataatcg                       atagccaaca 


SPP00000648_2.0  149 SLRPKTEKKPLRSS                          YSPLSGDAG 
                      L+PKT KKPLRS+                          Y+PL+G  G 
                     VLKPKTSKKPLRSA          G:D[gac]        YNPLAGQGG 
OMLM01015868.1-39743 gcacaaaaacccagGGTATGTA  Intron 5   CAGACtaccggcgg 
                     ttacacgaactggc <1-----[39700:39300]-1>  aactcgagg 
                     gcagaccgggtctt                          cttgtagaa 


SPP00000648_2.0  173 GSCSWRPGRRGPSAGG                                  
                     GSCSWRPGRRGPS+GG                                  
                     GSCSWRPGRRGPSSGG                                  
OMLM01015868.1-39270 gttttacgaagcttgg                                  
                     gcgcggcggggcccgg                                  
                     ccccgatcgaagatta                                  


//
Making a A in phase 1 intron
Making a D in phase 1 intron
Making a D in phase 1 intron
>OMLM01015868.1:subseq(0,51105).pep
EAGVPYQVERAPPKNQDLSFFSQFAGELLSQYGWYLLVFTVLVYLLIQHLSKRRTSQSSP
PHTEQDASLVSRRQEAMEAARRRMQEELDAKAAAFKEKQKQQEEEKRRQKIEIWESMRQG
QSYKGGTKISQTTEEASSSTTVLKPKTSKKPLRSADYNPLAGQGGGSCSWRPGRRGPSSG
G
//
>OMLM01015868.1:subseq(0,51105).[43191:39221].sp
GAAGCTGGAGTGCCTTATCAGGTGGAAAGAGCGCCCCCTAAAAACCAGGATCTGAGCTTC
TTTAGCCAATTTGCAGGGGAGCTCCTGTCCCAGTATGGGTGGTACCTCCTGGTTTTCACT
GTGCTTGTCTACCTGCTCATCCAACACCTGAGCAAGAGAAGAACCAGCCAAAGCTCACCC
CCCCACACTGAGCAAGATGCTTCACTGGTGTCAAGAAGGCAAGAAGCCATGGAAGCAGCG
CGAAGAAGGATGCAAGAGGAGCTTGATGCTAAAGCAGCTGCTTTCAAAGAAAAACAGAAA
CAGCAAGAAGAAGAGAAGAGGAGGCAGAAAATCGAGATATGGGAGAGTATGCGACAGGGG
CAGAGTTACAAAGGAGGTACAAAAATTTCCCAGACAACTGAAGAGGCCAGCTCATCAACC
ACAGTGCTCAAACCGAAAACCAGCAAGAAGCCGCTTCGCAGTGCTGACTACAATCCTCTG
GCTGGACAGGGAGGAGGCTCCTGCTCCTGGAGACCTGGCAGGAGAGGACCGTCATCTGGT
GGA
//
OMLM01015868.1:subseq(0,51105)	GeneWise	match	43191	39223	149.87	-	.	OMLM01015868.1:subseq(0,51105)-genewise-prediction-1
OMLM01015868.1:subseq(0,51105)	GeneWise	cds	43191	43119	0.00	-	0	OMLM01015868.1:subseq(0,51105)-genewise-prediction-1
OMLM01015868.1:subseq(0,51105)	GeneWise	intron	43118	41933	0.00	-	.	OMLM01015868.1:subseq(0,51105)-genewise-prediction-1
OMLM01015868.1:subseq(0,51105)	GeneWise	cds	41932	41810	0.00	-	2	OMLM01015868.1:subseq(0,51105)-genewise-prediction-1
OMLM01015868.1:subseq(0,51105)	GeneWise	intron	41809	40997	0.00	-	.	OMLM01015868.1:subseq(0,51105)-genewise-prediction-1
OMLM01015868.1:subseq(0,51105)	GeneWise	cds	40996	40890	0.00	-	2	OMLM01015868.1:subseq(0,51105)-genewise-prediction-1
OMLM01015868.1:subseq(0,51105)	GeneWise	intron	40889	40797	0.00	-	.	OMLM01015868.1:subseq(0,51105)-genewise-prediction-1
OMLM01015868.1:subseq(0,51105)	GeneWise	cds	40796	40707	0.00	-	0	OMLM01015868.1:subseq(0,51105)-genewise-prediction-1
OMLM01015868.1:subseq(0,51105)	GeneWise	intron	40706	39774	0.00	-	.	OMLM01015868.1:subseq(0,51105)-genewise-prediction-1
OMLM01015868.1:subseq(0,51105)	GeneWise	cds	39773	39701	0.00	-	0	OMLM01015868.1:subseq(0,51105)-genewise-prediction-1
OMLM01015868.1:subseq(0,51105)	GeneWise	intron	39700	39300	0.00	-	.	OMLM01015868.1:subseq(0,51105)-genewise-prediction-1
OMLM01015868.1:subseq(0,51105)	GeneWise	cds	39299	39223	0.00	-	2	OMLM01015868.1:subseq(0,51105)-genewise-prediction-1
//